PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019188009.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family G2-like
Protein Properties Length: 295aa    MW: 32003.8 Da    PI: 6.8817
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019188009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.81.6e-3096149155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_019188009.1  96 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 149
                     59*******************.********************************8 PP
2Myb_DNA-binding48.22.5e-1598148148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
   XP_019188009.1  98 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 148
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MREEDSNWFA KWEEELPPPD ELMPLSQTLI TPDLALAFDI QNPSSPHHPP IQPPLMAVQT  60
PPSSQPNSSA EFDSADLGGA AAASGGGDEP ARTLKRPRLV WTPQLHKRFV DAVAHLGIKN  120
AVPKTIMQLM SVDGLTRENV ASHLQKYRLY LKRMQGLSNG GGGGGGGNNS AGAGVDAATD  180
HLFASSPVPP HFLHPVRSNS DHFLPFVPVA AAMQHHHQMV GHHPQLQQQY RHFGSPPNGQ  240
FEHTFLSRQS QQQVQRIGAP VHNNNNANSL VPSYVEDVES ANGRKVLTLF PTGGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.16e-81G2-like family protein