PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019187721.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 407aa MW: 45452.7 Da PI: 6.8398

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019187721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.7	2e-31	246	300	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LH+rFve v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR XP_019187721.1 246 KTRIRWTQDLHDRFVESVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRN 300 68****************************************************6 PP
2	Myb_DNA-binding	45.1	2.3e-14	250	299	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+++++++v+ v++lGg t+k+I + m +g+t ++ks++qky+ XP_019187721.1 250 RWTQDLHDRFVESVNRLGGAekaTPKAILKLMDsEGLTIFHVKSHLQKYR 299 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MKFQTFSSAQ ERAQQSYGFG RDFGLEMLRN PHQSFGAQQH YSPVSPPGMV QCFVPAEEAS 60 MCHQQQQQNV GSANASSTSS IMHQIGSLEA FFATEQCLGL SQYDDEDENG SKNFDQQIVP 120 YQGNGGLFGY TQGQTEPDLQ AKNLAQAFLK SQFSNGSERL YRNPPFCNLS EKERILLLKK 180 KLFEDVLDGP PIKGHPAITL DGNQDYGVSH NPNGSHLANL RLHHPGNPLT CPPPNSASPA 240 GSMSSKTRIR WTQDLHDRFV ESVNRLGGAE KATPKAILKL MDSEGLTIFH VKSHLQKYRN 300 AKYSPESPEG KSEKRSTLNN ASEIDSKAGT QIKEALQMQL EVQRRLHEQL EIQKKLQMRI 360 EEQSKQLKRI FDQQQKTTKS LLDSQTSCIT SSPEDDDPLI SREADVS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MKFQTFSSAQ ERAQQSYGFG RDFGLEMLRN PHQSFGAQQH YSPVSPPGMV QCFVPAEEAS  60
MCHQQQQQNV GSANASSTSS IMHQIGSLEA FFATEQCLGL SQYDDEDENG SKNFDQQIVP  120
YQGNGGLFGY TQGQTEPDLQ AKNLAQAFLK SQFSNGSERL YRNPPFCNLS EKERILLLKK  180
KLFEDVLDGP PIKGHPAITL DGNQDYGVSH NPNGSHLANL RLHHPGNPLT CPPPNSASPA  240
GSMSSKTRIR WTQDLHDRFV ESVNRLGGAE KATPKAILKL MDSEGLTIFH VKSHLQKYRN  300
AKYSPESPEG KSEKRSTLNN ASEIDSKAGT QIKEALQMQL EVQRRLHEQL EIQKKLQMRI  360
EEQSKQLKRI FDQQQKTTKS LLDSQTSCIT SSPEDDDPLI SREADVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	7e-67	G2-like family protein