PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019187463.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 411aa MW: 46068.6 Da PI: 7.937

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019187463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.2	3.7e-33	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt++LHerFveav+qLGG++kAtPk++l+ m+++gLtl+h+kSHLQkYRl XP_019187463.1 45 KPRLKWTQDLHERFVEAVNQLGGADKATPKSVLKQMGIQGLTLYHLKSHLQKYRL 99 79****************************************************8 PP
2	Myb_DNA-binding	62.7	7.6e-20	47	98	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++v+av+qlGg t+k++ + mg +g+tl+++ks++qky+ XP_019187463.1 47 RLKWTQDLHERFVEAVNQLGGAdkaTPKSVLKQMGiQGLTLYHLKSHLQKYR 98 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MYHHHRQGKS MHPSTNMLMP PERHLFMQGE NGHGDSGLVL STDAKPRLKW TQDLHERFVE 60 AVNQLGGADK ATPKSVLKQM GIQGLTLYHL KSHLQKYRLS KNLHGHANSS SNKARMDAAT 120 GSDKIPEANG NHINSANIGP LANTNLPISE AIQIQIEVQR RLHEQLEVQR HLQLRIEAQG 180 KYLQAVLEKA QETLGRQDLG KMGLEAAKAQ LSELVSKVSN QCLNSAFSGI KELPGFCQQQ 240 AQATQPTDCS LDSCLTSSEG SLRDHEMRNS QMGLRSLNFG AHMESTDLYN ETRLKQTEFR 300 WCDDIWENRK YLSKMDEETK NNGLSVSTGL QGGKWNGNSN YSDRRFTGTD ADVKLFAQAV 360 DRSDTSKPEK QKTSQEYKLP YFGPKLDLNT DDKTDVASSC KQLDLNGFSW N

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MYHHHRQGKS MHPSTNMLMP PERHLFMQGE NGHGDSGLVL STDAKPRLKW TQDLHERFVE  60
AVNQLGGADK ATPKSVLKQM GIQGLTLYHL KSHLQKYRLS KNLHGHANSS SNKARMDAAT  120
GSDKIPEANG NHINSANIGP LANTNLPISE AIQIQIEVQR RLHEQLEVQR HLQLRIEAQG  180
KYLQAVLEKA QETLGRQDLG KMGLEAAKAQ LSELVSKVSN QCLNSAFSGI KELPGFCQQQ  240
AQATQPTDCS LDSCLTSSEG SLRDHEMRNS QMGLRSLNFG AHMESTDLYN ETRLKQTEFR  300
WCDDIWENRK YLSKMDEETK NNGLSVSTGL QGGKWNGNSN YSDRRFTGTD ADVKLFAQAV  360
DRSDTSKPEK QKTSQEYKLP YFGPKLDLNT DDKTDVASSC KQLDLNGFSW N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	1e-134	G2-like family protein