PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019187150.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 283aa    MW: 31614.2 Da    PI: 6.5211
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019187150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-172878155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s++ GVr+++ +grWvAeI+d +   ++ r +lg++ taeeAa a+++a+  l+g
  XP_019187150.1 28 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTYETAEEAACAYDQAACLLRG 78
                    79********.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MEIHFQQKQI IPVNKLPKFK GRTRNNNSKF VGVRQRPSGR WVAEIKDTTQ KIRMWLGTYE  60
TAEEAACAYD QAACLLRGSN TRTNFVTCLP PDSALASRIR KIFNSKKNNA KRADVGPYHP  120
SPQHNSSSSN SNAKTSEDGS VTSFKNQDTS SSDFGLESIP IFSDQESGKL QLFENTYKPD  180
LSTCSDELEL RSSPSSSSSS SSSSEPKAVV SWSFQQGIEF AQEMVDFNKT EEMGFSEFER  240
MKVERSISAS LYAVHGVQEY MQAVNDPANE ALWDLPPLCS LLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-25ERF family protein