PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019186469.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 256aa MW: 29177.3 Da PI: 8.6076 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 61.7 | 1.5e-19 | 4 | 145 | 131 | 266 |
GRAS 131 aLasRp.egppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvs 219 +L+ Rp ++pp +R+T++++++ + + + L +A+++++++++n l l++l+ ++L+ +p+E l+++ +++lh+l ++s + XP_019186469.1 4 ELTRRPgGPPPLVRLTVIDNHHFTstpflVSPPGYDFFKYLLGYAKRININLQINKLENFPLQNLNSQTLNSSPDEILIISAQFRLHNLSHHSPD 98 68999955667********96555888887777778889999**************8777*****************************966665 PP GRAS 220 leserdevLklvkslsPkvvvvveqeadhnse...sFlerflealeyysa 266 +s e+L+ +++l Pk vv++e++ad++ + +F++++++ +ey ++ XP_019186469.1 99 DRS---EFLRGLRNLGPKGVVLSENNADCSCShcgDFANGLSRRVEYLWM 145 555...********************998443355999999999999876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 256 aa Download sequence |
MEVELTRRPG GPPPLVRLTV IDNHHFTSTP FLVSPPGYDF FKYLLGYAKR ININLQINKL 60 ENFPLQNLNS QTLNSSPDEI LIISAQFRLH NLSHHSPDDR SEFLRGLRNL GPKGVVLSEN 120 NADCSCSHCG DFANGLSRRV EYLWMEGEAV KALTNVGEMN ECKEKWCQRM MSVGFVGQAF 180 REDAIDTARA WLPECGSMEE KDADGLVRRK ILSKKKIWLV SHGDGRRRSG AVDASLVRHR 240 QHRRVIQEIF ELHSRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13840.1 | 2e-47 | GRAS family protein |