PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019186454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 318aa MW: 35075 Da PI: 7.7602 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.5 | 2.3e-05 | 24 | 46 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F++k+ L H++ H XP_019186454.1 24 FSCKYCDRKFNNKHALGGHQNAH 46 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MAAAGQSREE DRAAEAVAVA EREFSCKYCD RKFNNKHALG GHQNAHRTER AMDLTAKRTR 60 RGDFMNYFPF SPFLGVSHLL AGAGGQVNYL NQAPSMPPYF LPGHPIPSPE IPAPRPPPYA 120 YPFSPAVSET GPLPSRPPME NHPPCARQVL LPEMTMSETG PLPSRSRVEN HPLRARQVLL 180 PEMTMSETGP LPSRPPGENY PPRARQVLLP EMTMSKTGTL PSRPPMENHP PRAHQVLLPE 240 MTMSETGPLP SRPPVKNHPP RAHQVFLPEM TISGDNTFPV GSFHANSAVT PMLGSIAINY 300 SNPMNAPEMI EDVDQNWI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66140.1 | 1e-09 | C2H2 family protein |