PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019186439.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 219aa    MW: 23588.3 Da    PI: 7.612
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019186439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.4e-05138160123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  XP_019186439.1 138 HECSYCGAEFSSGQALGGHMRRH 160
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTPPHSSATS EPIPAAPTPE DEDMARCLMI LSQGGGVSRH PPAIPKSPLY KEEESGGGSK  60
FCSKKYIETT TVGGGGGTSH TKEKPPLTTV ETAAVKRPLS LYDEEDINPY PFNKTPKISP  120
PFSSLHFYDS AKSSPRIHEC SYCGAEFSSG QALGGHMRRH RNSTAAAAAS QLSPSSSSFE  180
KRVLQKEENN GKGLNLDLNL LPAGEDNQDH RRAREPIVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-15C2H2 family protein