PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019186425.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 329aa MW: 36944.2 Da PI: 4.5486

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019186425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.1	6.8e-27	24	119	1	98
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL..pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppG+rF+Ptd elv eyLkkkv ++ ++l + ik+++iy ++P+d+ p v a+eke yfF++r kky++g r+ r++ +gyWkatg+d ++ XP_019186425.1 24 LPPGIRFRPTDGELV-EYLKKKVLKEAMPL-HRIKTCNIYLYHPNDIcrPDDV-AREKERYFFTTRIKKYPNGARPDRKAGDGYWKATGRDMPIS 115 79***********.**********.77**********433344.57899*********************************9 PP NAM 94 skkge 98 ++ g+ XP_019186425.1 116 CN-GQ 119 94.43 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEKEKASMEV TDLKAFSDQY FKSLPPGIRF RPTDGELVEY LKKKVLKEAM PLHRIKTCNI 60 YLYHPNDICR PDDVAREKER YFFTTRIKKY PNGARPDRKA GDGYWKATGR DMPISCNGQL 120 DECVLAKIYE KTTGSKKTAG PSSPSQDDSQ QIILDGSEQL PPEEQDNPIL EPENTPTAEQ 180 VAAPPPPQYP YHQNPMPEAT AAAHHGYNTY MMIPEPEPLP LPPPEAQDYP ILEPIQSHMA 240 PQVAELPPFP HQENPMDEAA AAAAFYSWDA GSYGFESLQT VDNCYGINSG AFGGFEEDNN 300 DFWGSQNGGL EDVVAMYARH KQNENEKKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	2e-17	NAC family protein