PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019186299.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 394aa MW: 44435.6 Da PI: 8.7474

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019186299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.5	4.5e-31	66	119	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++ave+LGG+e+AtPk +l+lm++kgL ++hvkSHLQ+YR+ XP_019186299.1 66 PRLRWTPDLHLRFLHAVERLGGQERATPKLVLQLMDIKGLNIAHVKSHLQMYRS 119 8****************************************************7 PP
2	Myb_DNA-binding	48.8	1.6e-15	67	118	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++++av++lGg t+k++ + m kg+ ++ks++q+y+ XP_019186299.1 67 RLRWTPDLHLRFLHAVERLGGQeraTPKLVLQLMDiKGLNIAHVKSHLQMYR 118 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MEESGETVCS KTTSDDSNKF EEDEDETNES PRNQTVKDGG SSSNSTVEES GEKKASVRPY 60 VRSKMPRLRW TPDLHLRFLH AVERLGGQER ATPKLVLQLM DIKGLNIAHV KSHLQMYRSK 120 KTEDPSQGFA NHRAFMEGGD RNVFNLSQLP MFKIFNNQRL NPPFRYGDDS YRNCQEKWMN 180 GTAMAHGTAD RGRPYEALYE RFRSNYDLSR ETINPPFTER SNRGLHELKE KLGSFLENQT 240 WHHQFAPQNP IQHQPIQVPE PKTMARTGSS VGSWVTDCRP EPKTTVMNSL VGSWVADRGQ 300 EPKATTLENR NAAVSAKLQK QETMKRKADL DLNLSLGMKS MKEKSMEGLG EDESGLTLSL 360 SSSSSSKLRK LNQDDTNNFT KSGKGGASTL DLTL

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MEESGETVCS KTTSDDSNKF EEDEDETNES PRNQTVKDGG SSSNSTVEES GEKKASVRPY  60
VRSKMPRLRW TPDLHLRFLH AVERLGGQER ATPKLVLQLM DIKGLNIAHV KSHLQMYRSK  120
KTEDPSQGFA NHRAFMEGGD RNVFNLSQLP MFKIFNNQRL NPPFRYGDDS YRNCQEKWMN  180
GTAMAHGTAD RGRPYEALYE RFRSNYDLSR ETINPPFTER SNRGLHELKE KLGSFLENQT  240
WHHQFAPQNP IQHQPIQVPE PKTMARTGSS VGSWVTDCRP EPKTTVMNSL VGSWVADRGQ  300
EPKATTLENR NAAVSAKLQK QETMKRKADL DLNLSLGMKS MKEKSMEGLG EDESGLTLSL  360
SSSSSSKLRK LNQDDTNNFT KSGKGGASTL DLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-56	G2-like family protein