PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185880.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ZF-HD
Protein Properties Length: 344aa    MW: 36359.4 Da    PI: 8.3524
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer108.43.9e-3467124359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                      v+Y+eClkNhAa+lGghavDGCgEfm+s++++ +++++lkCaACgCHRnFHRre+ e
  XP_019185880.1  67 VVHYRECLKNHAAALGGHAVDGCGEFMASPTANpADPTSLKCAACGCHRNFHRREPPE 124
                     589******************************9********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEISSSCGAA AAATVKTPEA DTETPTAAAR IYPAKPLSYS SNGVLKRLNH PRHGGGFGSN  60
GHHHPVVVHY RECLKNHAAA LGGHAVDGCG EFMASPTANP ADPTSLKCAA CGCHRNFHRR  120
EPPEEVLSPH DAVAALEYQP HHRHHPPPPP PQGHRGGGGS GCHSSPNSSS PPPISSAYYP  180
SASHVLLALG TGLSALQTDN TAPISVTAVT PPSNPNARKR FRTKFTQDQK DKMLEFADKI  240
GWRIQKRDED LINEFCAKIG VERGVLKVWM HNNKNTVGKK DQPAAAAADD NAHGVDFDLV  300
STKTHNLAST ATATAVAAGA CQFDVKNENG SRSVTATNGS FYSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.12e-60ZF-HD family protein