PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019185788.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 388aa MW: 42763.5 Da PI: 4.7976

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019185788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.1	3.7e-32	56	196	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 p+G++F+P+d el+ e+L++k+ + + + l+e+i++++ i++++P++Lp +k++ ++ +fF +++k+yatg+rk+r+ +++ XP_019185788.1 56 PAGVKFEPSDVELL-EHLAAKCGEGNsephMFLDEFIPTLEgdegICYTHPENLP-GIKKDGSSGHFFYRTKKAYATGTRKRRKisnetslvMEH 148 89**********.999999988886766333334554422344******.777888899**************868887777779 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +W++tgk+k+v++ +g ++g+kk++v+y +++ +k+ kt+Wvmh+y+l XP_019185788.1 149 VRWHKTGKTKAVME-NGVQKGCKKVMVLYsTKKGEKPGKTNWVMHQYHL 196 99********.999*******434677788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGRSWLINSR GLAQKVRNAS SPAENRIQDC GATRECPNCH HLIDNSDVSP EWPGFPAGVK 60 FEPSDVELLE HLAAKCGEGN SEPHMFLDEF IPTLEGDEGI CYTHPENLPG IKKDGSSGHF 120 FYRTKKAYAT GTRKRRKISN ETSLVMEHVR WHKTGKTKAV MENGVQKGCK KVMVLYSTKK 180 GEKPGKTNWV MHQYHLGIDE DEKEGGYVVS KIYYQQQQQK QTTDNAGESD IPQAIPTTPM 240 TAIPNPPRAA GETPLSCDDY NAALSPPAEE VEGGKKERYG SLWSDVQVKC EEYPGCLAGE 300 SQAAADATDI DDFLLCDEIV GSFDFNNLPS NHATSANFNP MPQEANNTSS STNIADLVNL 360 ELDSAPEFSL QDLPFGSQDS ISSWLDRL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGRSWLINSR GLAQKVRNAS SPAENRIQDC GATRECPNCH HLIDNSDVSP EWPGFPAGVK  60
FEPSDVELLE HLAAKCGEGN SEPHMFLDEF IPTLEGDEGI CYTHPENLPG IKKDGSSGHF  120
FYRTKKAYAT GTRKRRKISN ETSLVMEHVR WHKTGKTKAV MENGVQKGCK KVMVLYSTKK  180
GEKPGKTNWV MHQYHLGIDE DEKEGGYVVS KIYYQQQQQK QTTDNAGESD IPQAIPTTPM  240
TAIPNPPRAA GETPLSCDDY NAALSPPAEE VEGGKKERYG SLWSDVQVKC EEYPGCLAGE  300
SQAAADATDI DDFLLCDEIV GSFDFNNLPS NHATSANFNP MPQEANNTSS STNIADLVNL  360
ELDSAPEFSL QDLPFGSQDS ISSWLDRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	9e-96	NAC family protein