PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019185728.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27567.3 Da PI: 9.8378 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.7 | 1.7e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gkl+eys+ XP_019185728.1 9 KRIENKISRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSTQGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 99 | 7e-33 | 76 | 173 | 2 | 99 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++++ + ++++++++++ ++ kL ++ie Lqr+ R++lG+dLe+Lsl+eLq+LeqqL+++lk+iR++Kn+l++e+i+elqkke++lq +n+ L k XP_019185728.1 76 AEQRLTTNDSEQQQNWSCQYPKLVSRIELLQRSTRNFLGDDLEPLSLRELQSLEQQLDTGLKRIRTRKNQLMHESISELQKKERALQVQNNILAK 170 566777788999*********************************************************************************** PP K-box 97 kle 99 ++e XP_019185728.1 171 QVE 173 997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGRGRVELKR IENKISRQVT FSKRRSGLLK KAHEISVLCD ADVALIVFST QGKLFEYSTD 60 SSMENILERY ERYSYAEQRL TTNDSEQQQN WSCQYPKLVS RIELLQRSTR NFLGDDLEPL 120 SLRELQSLEQ QLDTGLKRIR TRKNQLMHES ISELQKKERA LQVQNNILAK QVEQQKLVQN 180 SASTSMPPHP LVSPLPLPNL TIGSIARATE AAKNSENRGQ APPCSTSLVP PWMLRHPNNN 240 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 3e-78 | MIKC_MADS family protein |