PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019185567.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 726aa MW: 78678.7 Da PI: 6.9483

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019185567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	519	556	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_019185567.1 519 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 556 664559******************************88 PP
2	BELL	121.2	4.3e-39	381	451	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sF+ v+g g+a pYtslA++a+SrhFrcLkdaia q+ XP_019185567.1 381 RLEHQRRKVKLLSMLDEVDRRYSHYCEQMQMVVNSFDLVMGFGAAVPYTSLAQRAMSRHFRCLKDAIAAQL 451 779*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MSGDYHHHPH THPTGIFSFS NGFERSPAEQ QQQQQHVAQH IRREKMRVQG FEPPPPPLVG 60 IEEEQAGGLQ VYETAGMLSE MFNFQAGTAT ELLENQISQS YRNANPRPPG IGSEWYGKNP 120 SHQQQQNMSG INAAAAVADM QLFLMNPQPR SPSPSPSHPH QPPSTLHMLL PNPSPTSTLQ 180 GFHTQPGGPF GQFTWIPDSS NGGGPANTAE IGGVNVVEAQ GLSLSLSSSL QHLEAAKAEE 240 LRMGEDGGML FFSQAAPGSA SAQYPYNKTL NLTSGGGAAA GGHQFLQTLH NLPGGGLVGQ 300 NHQVHFGSSL GIVNALRNSK YAKPAQELLE EFCSVGRGQL KNQKTGKLIN AAATQNPNSN 360 PNTSTSPSSS KDPPPLSPSD RLEHQRRKVK LLSMLDEVDR RYSHYCEQMQ MVVNSFDLVM 420 GFGAAVPYTS LAQRAMSRHF RCLKDAIAAQ LKHSCELLGE KDAGTSGITK GETPRLRMLE 480 QSLRQQRAFH QMGMMEQEAW RPQRGLPERS VNILRAWLFE HFLHPYPSDA DKHLLARQTG 540 LSRNQVSNWF INARVRLWKP MVEEMYQQEA QEEDEDGEKI QDSPNSGNNN TAQMSPPNSS 600 NSPPPPLPPP AAAAAVTTAS ITPTTTAPTG KRSEFNDRES DPSLLAINTQ RCFSQTQSKS 660 SSAALPAAQS FPAVLSASFG APSDIGPSTL IRFGTSAAAA AAAGDVSLTL GLRHDGNLPE 720 KTHFFD

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MSGDYHHHPH THPTGIFSFS NGFERSPAEQ QQQQQHVAQH IRREKMRVQG FEPPPPPLVG  60
IEEEQAGGLQ VYETAGMLSE MFNFQAGTAT ELLENQISQS YRNANPRPPG IGSEWYGKNP  120
SHQQQQNMSG INAAAAVADM QLFLMNPQPR SPSPSPSHPH QPPSTLHMLL PNPSPTSTLQ  180
GFHTQPGGPF GQFTWIPDSS NGGGPANTAE IGGVNVVEAQ GLSLSLSSSL QHLEAAKAEE  240
LRMGEDGGML FFSQAAPGSA SAQYPYNKTL NLTSGGGAAA GGHQFLQTLH NLPGGGLVGQ  300
NHQVHFGSSL GIVNALRNSK YAKPAQELLE EFCSVGRGQL KNQKTGKLIN AAATQNPNSN  360
PNTSTSPSSS KDPPPLSPSD RLEHQRRKVK LLSMLDEVDR RYSHYCEQMQ MVVNSFDLVM  420
GFGAAVPYTS LAQRAMSRHF RCLKDAIAAQ LKHSCELLGE KDAGTSGITK GETPRLRMLE  480
QSLRQQRAFH QMGMMEQEAW RPQRGLPERS VNILRAWLFE HFLHPYPSDA DKHLLARQTG  540
LSRNQVSNWF INARVRLWKP MVEEMYQQEA QEEDEDGEKI QDSPNSGNNN TAQMSPPNSS  600
NSPPPPLPPP AAAAAVTTAS ITPTTTAPTG KRSEFNDRES DPSLLAINTQ RCFSQTQSKS  660
SSAALPAAQS FPAVLSASFG APSDIGPSTL IRFGTSAAAA AAAGDVSLTL GLRHDGNLPE  720
KTHFFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-145	TALE family protein