PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019185466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | WRKY | ||||||||
Protein Properties | Length: 477aa MW: 52140.3 Da PI: 8.9546 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.7 | 4.9e-33 | 226 | 282 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK vkgse+prsYYrCt+ +C v+kkvers d++++eitY+g+Hnhe XP_019185466.1 226 SDGYNWRKYGQKLVKGSECPRSYYRCTHLNCAVRKKVERSP-DGHIIEITYKGKHNHE 282 7****************************************.***************7 PP | |||||||
2 | WRKY | 105 | 4.1e-33 | 396 | 454 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+ +prsYYrCt++gC+v+k+ver++ dpk+v++tYeg+Hnh+ XP_019185466.1 396 LDDGYKWRKYGQKVVKGNANPRSYYRCTYKGCNVRKHVERASADPKAVITTYEGKHNHD 454 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MGESREGVSA VSGPPRPTIT IPPRAPFDTL FALGSIPGFS PGPMTLMSSF FSDSDACSFS 60 QLLAGAMASP LANPTLLPDN PLKVGDSGPG SEKLSGYKQK QPMSLLVAQS PLFMVSPRFS 120 PSGLLNSPGF LSPLQSPFGM SHQQALAHVT AQAAFNHSYK QMQAEYQHSS SVEGAGHQTS 180 SSMPNQGVQG EAANVALDPE SLKVETSELS QVDGKVSSGA IEKPASDGYN WRKYGQKLVK 240 GSECPRSYYR CTHLNCAVRK KVERSPDGHI IEITYKGKHN HEIPKSNKRK LDDCDRESRE 300 DNSREKPQSG SRSWTETNRS NKVVCSQPET VSTKLRSEQL SVASKRNEME ETATVLDEKD 360 DGEPNAERRI SEAGSSHKTV MEPKIIVQTR SEVDLLDDGY KWRKYGQKVV KGNANPRSYY 420 RCTYKGCNVR KHVERASADP KAVITTYEGK HNHDTPNAPN NNHSVTNKSS IQKLVAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 1e-119 | WRKY family protein |