PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019185444.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 519aa MW: 56257.7 Da PI: 8.4436

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019185444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.2	4.5e-30	248	307	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+k+v+r++++ +v+++tYeg+Hnh+ XP_019185444.1 248 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVAaSCPVRKQVQRCSDNMSVLITTYEGTHNHP 307 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MVHYYKTPSK SHFFIQISVA LKMADSLDIS GDGSAKQTAG NSSAGRQEGF ITAVLKKDEG 60 RAAATVKAEM KEVKEENARL KTLLAKIEKD YSSLQMRFFD VFSHQPAEIE KKSCKINDDE 120 ETQISLRLGR SPSPDRRHSR VIDDINAAAA KSTDEDEEHN QTLKLGLDYG GVQPDNKSTE 180 PNLELSSDRQ SPDNSASETK EEDAAAAGET WPPSKALKAT RSGDDELSQP SVKRARVSVR 240 ARCDTPTMND GCQWRKYGQK VAKGNPCPRA YYRCTVAASC PVRKQVQRCS DNMSVLITTY 300 EGTHNHPLPV SATAMASTTS AAASMLLSGS TTSQTGLRSL PSPATNFFPG LNFSLPADTS 360 RTRPLYFPNS SSPPFPTITL DLTTSSNNVS SMFSSNVMKS TPRFPSTNLS FSSSESNISP 420 AIWSTGGYTN YSTIYNRNTN ILGTSQPGKS SQEQQFYGQA AAASQQALTE TLTKAITSDP 480 SLQSVIAAAI TSMVGNNPPM QHKRVKVNDE VMGTHQAII

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MVHYYKTPSK SHFFIQISVA LKMADSLDIS GDGSAKQTAG NSSAGRQEGF ITAVLKKDEG  60
RAAATVKAEM KEVKEENARL KTLLAKIEKD YSSLQMRFFD VFSHQPAEIE KKSCKINDDE  120
ETQISLRLGR SPSPDRRHSR VIDDINAAAA KSTDEDEEHN QTLKLGLDYG GVQPDNKSTE  180
PNLELSSDRQ SPDNSASETK EEDAAAAGET WPPSKALKAT RSGDDELSQP SVKRARVSVR  240
ARCDTPTMND GCQWRKYGQK VAKGNPCPRA YYRCTVAASC PVRKQVQRCS DNMSVLITTY  300
EGTHNHPLPV SATAMASTTS AAASMLLSGS TTSQTGLRSL PSPATNFFPG LNFSLPADTS  360
RTRPLYFPNS SSPPFPTITL DLTTSSNNVS SMFSSNVMKS TPRFPSTNLS FSSSESNISP  420
AIWSTGGYTN YSTIYNRNTN ILGTSQPGKS SQEQQFYGQA AAASQQALTE TLTKAITSDP  480
SLQSVIAAAI TSMVGNNPPM QHKRVKVNDE VMGTHQAII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-56	WRKY family protein