PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019185423.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GeBP
Protein Properties Length: 330aa    MW: 36906.9 Da    PI: 8.3519
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019185423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57386.63.2e-2756150297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     +f+r+w+e+Dei +LqGl+d++a+       d++ fy  +++ +s  ++ksql+eK+rrL+kKf+  +++ ++g++ s+ ++hd+  +++sk++W
  XP_019185423.1  56 KFHRIWTESDEIRFLQGLLDCAAESL-AFPRDLNVFYTRFSSTMSQPYTKSQLSEKLRRLRKKFRVISARLAKGHDWSLLSPHDRALYDISKRLW 149
                     699******************77766.6667**************************************************************** PP

          DUF573  97 g 97 
                     +
  XP_019185423.1 150 H 150
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MDPTQTLKSS TASKLPIKRK TPPNSFTSSA PDSPPPAVAA VHGGCNTQEP APPPFKFHRI  60
WTESDEIRFL QGLLDCAAES LAFPRDLNVF YTRFSSTMSQ PYTKSQLSEK LRRLRKKFRV  120
ISARLAKGHD WSLLSPHDRA LYDISKRLWH PDFAATSPFC YSSGAEGPRN SGGLVGVAVS  180
FMPSLPSVLA SNHSNNNANE KANDEIGLDG DVKLREVNVE FDDDDGIVVG KMANLSGLKP  240
NCGVGEATAK VVVDVFDECL KELRKDLVGE KSNLDASFKQ GNVESFEERW RKQRVAELDV  300
FSKRMREYIC YYSSYLDVNK FFHLLLMKYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.17e-20GeBP family protein