PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019185295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 145aa MW: 15995.9 Da PI: 6.5195 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.5e-18 | 10 | 61 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y GVr ++ +g+++AeIrd + ng +r+++g+f ae+Aa a+++a+++++g XP_019185295.1 10 SNYIGVRKRP-WGKYAAEIRDSTRNG--TRVWIGTFNCAEDAALAYDQAALAMRG 61 5699******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
METDTSAKAS NYIGVRKRPW GKYAAEIRDS TRNGTRVWIG TFNCAEDAAL AYDQAALAMR 60 GTSASLNFPA EFVRKSLEEL DCKEGTSMAA ALKEKHKKRT RRHGKANPPS CEKEEETNNN 120 GVLVFEDLGS DLLDELLSQT SSSCM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 9e-28 | ERF family protein |