PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019184975.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 377aa    MW: 41386.7 Da    PI: 7.7291
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019184975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3101.64.6e-3271175199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++++e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_019184975.1  71 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFHRGlGElGK 165
                     89****************************66677899*************************************************77788999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++ ++r+
  XP_019184975.1 166 DRLFIDWRRR 175
                     9999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MNFMSNDRQA GMRSSSSSAS SSSTSSQQRH SAALSYGIRQ QGVWFDEGCS SCPTGNNNGD  60
GREIIEREHM FDKVVTPSDV GKLNRLVIPK QHAEKYFPLD SSSNEKGLLL NFEDRNGKPW  120
RFRYSYWNSS QSYVMTKGWS RFVKDKKLDA GDIVSFHRGL GELGKDRLFI DWRRRPNPHH  180
EFHLTAAAIP HHFSFNRSVH HHHYPPPPLP AGGWNYHAMF PGGHSHSHNS YAYNNYAIGC  240
GPPLPPPPNY PTFNSQFNPA AALNGNPCPG GSTIYYHRSA EEEAPPAQSG GGGGAVVLES  300
VPVVQGKTAA TAKRLRLFGV NMECPIPESD DCSSPAALIP SSYHLSSSSY GDGPSDQDSP  360
FDKAKTTSSS MSLDLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.16e-75B3 family protein