PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019184442.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 337aa MW: 36597.9 Da PI: 6.9385

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019184442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.9	5.6e-34	48	102	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_019184442.1 48 KQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 102 79****************************************************8 PP
2	Myb_DNA-binding	63.2	5e-20	50	101	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_019184442.1 50 RLRWTNELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 101 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MYQPNGVSSS NLVHSNAMGI QPLESGPSTM DPISGGNNLN NNPSLASKQR LRWTNELHER 60 FVDAVAQLGG PDRATPKGVL RVMGVQGLTI YHVKSHLQKY RLAKYLPDSS SDGKKADKKE 120 SRDMISNLDG SSGMQITEAL KLQMEVQKRL HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR 180 LSGVLTEAPG SGVNPAAGEH GPESINATDP PSTPAPTSES PHGDKHAKER APAKSHSLDE 240 SFSSHHEPLT PDSGGHETSQ IESPTGERPS KMQKLDSGAA LAKPNVMLTH PILESSLSPP 300 SYQQPDTVFL TREHLSHSSG LSIGNEDPRE KICSGNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	7e-88	G2-like family protein