PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019184375.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 748aa MW: 85431.6 Da PI: 7.5106

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019184375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	141	7.3e-44	292	419	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...sgyWkatgkdkevl 93 p G+rFhPtdeel+++yL +k+++ ++ + +i+e d++++ePwdL v +++ew+fFs+rd k atg+r rat+ +gyW++tg+dke+l XP_019184375.1 292 PLGYRFHPTDEELITNYLWRKIADPSFFA-GAIEEWDLNRLEPWDLLPGVCVGKREWFFFSRRDMKDATGQRIDRATHsvsKGYWETTGSDKEIL 385 89**********************888.89**********535556889****************9887779********* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++lvg+kktL+fy+gr p+ge+tdW+mheyrl XP_019184375.1 386 K-GKSLVGMKKTLIFYRGRPPSGERTDWLMHEYRL 419 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 748 aa Download sequence
MSILFTQLYG EDKGKTMFDE VVVVGLKELF QDYVACFHVQ FVPENSDKSA PLVIISDSVS 60 VGKPQALLRS QIKKQKLGSA DLSMKKTELE VYLSEVIVDD EDSFDLLRWW KLNSDRFPVL 120 SKMARDVFAV PISTVAFESA FSTSGMVLDA FRSSQTPKIV EALVCAQDWL RLANQPISVE 180 ENIEDVERIE KELIPPLTFY SESHFISLKH KVVLLVECLT VYISSRKRKF LGRLSCINFL 240 DGLGASKPPN SFRFGRKLLS RPKEKMSGFC GSHDSVESSS VEKDSGDSIR IPLGYRFHPT 300 DEELITNYLW RKIADPSFFA GAIEEWDLNR LEPWDLLPGV CVGKREWFFF SRRDMKDATG 360 QRIDRATHSV SKGYWETTGS DKEILKGKSL VGMKKTLIFY RGRPPSGERT DWLMHEYRLV 420 NINYLHMIPK LPQNAKNEWV ICKVFLEKKT YIPLGIQDLK LPVIQNTLLM NLIFLASQTL 480 ADEAEVGKHN VNCCRRSILS RNGSSSNNEY VVSRLEGDNS LHKLPELPQL PALELSELPQ 540 LPAHELSKHP LSLPQVAKNE WVICKVFLKS SLEKKTFAEM HTLFLSLIIF LAVQTLAWAS 600 NYSSTNEAEV GKHKVNCCRR TALLRKDNNN EYVGGVRKLQ PKLQIIQQWM ENFMLSHNNT 660 TMDDNSRVWV KVGYNNDTVM FLLPFATMDS LKAEILKRFN KLESAKFKIM YKDEDEEMVT 720 IACDEDLHYC LEFFKSTGTT PVTLSLSI

Sequence ? help Back to Top

Protein Sequence Length: 748 aa Download sequence

MSILFTQLYG EDKGKTMFDE VVVVGLKELF QDYVACFHVQ FVPENSDKSA PLVIISDSVS  60
VGKPQALLRS QIKKQKLGSA DLSMKKTELE VYLSEVIVDD EDSFDLLRWW KLNSDRFPVL  120
SKMARDVFAV PISTVAFESA FSTSGMVLDA FRSSQTPKIV EALVCAQDWL RLANQPISVE  180
ENIEDVERIE KELIPPLTFY SESHFISLKH KVVLLVECLT VYISSRKRKF LGRLSCINFL  240
DGLGASKPPN SFRFGRKLLS RPKEKMSGFC GSHDSVESSS VEKDSGDSIR IPLGYRFHPT  300
DEELITNYLW RKIADPSFFA GAIEEWDLNR LEPWDLLPGV CVGKREWFFF SRRDMKDATG  360
QRIDRATHSV SKGYWETTGS DKEILKGKSL VGMKKTLIFY RGRPPSGERT DWLMHEYRLV  420
NINYLHMIPK LPQNAKNEWV ICKVFLEKKT YIPLGIQDLK LPVIQNTLLM NLIFLASQTL  480
ADEAEVGKHN VNCCRRSILS RNGSSSNNEY VVSRLEGDNS LHKLPELPQL PALELSELPQ  540
LPAHELSKHP LSLPQVAKNE WVICKVFLKS SLEKKTFAEM HTLFLSLIIF LAVQTLAWAS  600
NYSSTNEAEV GKHKVNCCRR TALLRKDNNN EYVGGVRKLQ PKLQIIQQWM ENFMLSHNNT  660
TMDDNSRVWV KVGYNNDTVM FLLPFATMDS LKAEILKRFN KLESAKFKIM YKDEDEEMVT  720
IACDEDLHYC LEFFKSTGTT PVTLSLSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39610.1	1e-56	NAC family protein