PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019184371.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 284aa MW: 33251.9 Da PI: 6.3699

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019184371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	85.3	1.2e-26	26	131	2	129
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 p G+rF Ptdeel++++L+ k+++ ++ + + i+e+d+++veP e++ +fF++rd + ++g+Wk+tg+d+e+++ + XP_019184371.1 26 PLGYRFYPTDEELINHFLRIKIADPSFFT-TDIEEADLNRVEPGV--------ERKRFFFCRRDMIMK--------YATGFWKSTGEDREIFK-G 102 89*********************9877.56*******63........3578*998653........3579*********.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g+k++L+fy+g+ e+tdWvmheyrle XP_019184371.1 103 KTLIGMKRSLIFYRGS----ERTDWVMHEYRLE 131 99*******554....389******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MSNFCGSNDS AASPVEKDSG DSLRIPLGYR FYPTDEELIN HFLRIKIADP SFFTTDIEEA 60 DLNRVEPGVE RKRFFFCRRD MIMKYATGFW KSTGEDREIF KGKTLIGMKR SLIFYRGSER 120 TDWVMHEYRL EGDNLPQNAN EWVIGEVFLE NKTYIPPYDL QTHKRKANNN GGVRQLKPKL 180 TTHNYTTMED GACVEVRFNN DTVMFQLPFA TVDCLKAEIL KRFKTFESRK YFIQYKDEDE 240 LTITIFSDPE LDYCLKFFKS TGTTPVPLFL QLRESVLCQH CLFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39610.1	2e-40	NAC family protein