PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183706.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 319aa    MW: 34646.5 Da    PI: 5.9916
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.7e-21160210256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_019183706.1 160 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAMAHDKAAYKLRGE 210
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MAAAIDVYSS SSPVFADPFS EELMLALQPF MNYASSSSSS SSSSSSSSSS SSYYSLESCF  60
TAEPNVFPGS VPIPSANRAF SDGFASVGFE QSGPIGLNGL SPSHILEIQT QIELQHQQQK  120
EALAALSSSS SPVFTLFQNQ QKSPPLGTKP VPMKQKPGKL YRGVRQRHWG KWVAEIRLPK  180
NRTRLWLGTF DTAEEAAMAH DKAAYKLRGE NARLNFPHFL SHDHGVEGFK PLHSSVVAKL  240
EAICQSLTHN NDNSKSHEQQ RNSEEPCFGS GAAENAVNVK TESSGVGAAS SPESEITFLE  300
WENIILDKYP SAEIDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.13e-49ERF family protein