PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019183399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GRAS | ||||||||
Protein Properties | Length: 545aa MW: 60807.9 Da PI: 7.4939 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 402.2 | 5.3e-123 | 176 | 544 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++lL++cA+a+ ++++ ++l+++ + +s +gdp+qRl ay+ e+L a+ s+ + y+ l+ +e + ++ l+++++++e++P+lkf+++ XP_019183399.1 176 KQLLIACARALLAENKDHFDRLVEEARVSVSITGDPIQRLGAYMIEGLVAKKEASGANFYRGLKGKEPA---GKDLLSYMHILYELCPYLKFGYM 267 799*****************************************************************9...9********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189 +aN aI +a +e+r+HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+ + + l ++g++La + e++ +p+ef++ v ++ XP_019183399.1 268 AANGAIADACRNEDRIHIIDFQIGQGTQWMTLLQALAARPSGAPRVRITGIDDPVSQyaRGDGLAAVGKQLAAISEKFSIPVEFHA-VPVFAPKV 361 ******************************************************999999**************************.6888999* PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 + ++L+++pgE+laVn+ +qlh+++des +++++rd +L++vkslsPkvv++veqe+++n+++F+ rfle+l+yysa+f+s++++l+r+++eri+ XP_019183399.1 362 TRDMLDIRPGESLAVNFPFQLHHTPDESIDMNNPRDGLLRFVKSLSPKVVTLVEQESNTNTAPFFPRFLETLDYYSAIFESIDVTLARDKKERIN 456 *********************************************************************************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 vE+++l+r+ivnv+aceg+er+ rhe l+kW++r+++aGF+++pls+++++ +k+ll+ ++ + y++ e++g+++lgWk+r+L+s+ aW XP_019183399.1 457 VEQHCLARDIVNVIACEGQERVVRHELLGKWKSRFTMAGFREYPLSSYVNSVIKSLLKYYS-EHYTLVEKDGAMLLGWKQRNLISALAW 544 *********************************************************9999.66************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 545 aa Download sequence |
MDSHQFFGYG INGADFAYSS YPDIASIPTR HIGSLKFDSR TSPNSPFATH FDPQTPTSLS 60 DSQEQQSSTD NLSGISASSN SLLDYSSYLQ ESLLIPSGST SFHRNQKGKH VLWQHQEPLG 120 QKSRSWSQEG QISGLIEFQP SRVSSIGKPD GSVHSLKRYK TVQDFPLQGV PQGNIKQLLI 180 ACARALLAEN KDHFDRLVEE ARVSVSITGD PIQRLGAYMI EGLVAKKEAS GANFYRGLKG 240 KEPAGKDLLS YMHILYELCP YLKFGYMAAN GAIADACRNE DRIHIIDFQI GQGTQWMTLL 300 QALAARPSGA PRVRITGIDD PVSQYARGDG LAAVGKQLAA ISEKFSIPVE FHAVPVFAPK 360 VTRDMLDIRP GESLAVNFPF QLHHTPDESI DMNNPRDGLL RFVKSLSPKV VTLVEQESNT 420 NTAPFFPRFL ETLDYYSAIF ESIDVTLARD KKERINVEQH CLARDIVNVI ACEGQERVVR 480 HELLGKWKSR FTMAGFREYP LSSYVNSVIK SLLKYYSEHY TLVEKDGAML LGWKQRNLIS 540 ALAWH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 1e-174 | GRAS family protein |