PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183277.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 266aa    MW: 29595.8 Da    PI: 8.0608
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.52.4e-13158259199
                     EEEE-..-H.HHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsd.vlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+kvl+  d  lk++rl +pk++ae++  ++  + ++ +++ d++g++We+ ++   + +s++yvl+ G +++  a++ ++gD+v+F   ++  +
  XP_019183277.1 158 FEKVLSATDtDLKLSRLFIPKTCAETFfpDLCGRHGMPISILDTEGKQWEFFIRCwpNPSSKTYVLE-GLRDYIIAKKWQAGDIVTFC--QTkPG 249
                     67777655515677**********999**444456788***************87355556669999.********************..45499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     ++l+++++++
  XP_019183277.1 250 GKLMMGLRKT 259
                     9999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MASSSRKTCL QCQASSSSSN SDGFRNGWRL RSGEFAQLCR RCASAYDEGK FCETFHSNDD  60
GWRDCEACGK LVHCGCIVSF NTYLLLDFGG IMCIECSKIS FILARNRCMY PASPLPFGDP  120
QQDPSRKNQK ESQYCPHANG SELQQICTIP GSIVTPLFEK VLSATDTDLK LSRLFIPKTC  180
AETFFPDLCG RHGMPISILD TEGKQWEFFI RCWPNPSSKT YVLEGLRDYI IAKKWQAGDI  240
VTFCQTKPGG KLMMGLRKTS TGSASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.12e-32B3 family protein