PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019183034.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 317aa    MW: 35019.4 Da    PI: 7.1273
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019183034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.5e-52141391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeel+v+yL+kkv+g++++l ++i e+d+yk++Pw Lp+k++ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ 
  XP_019183034.1  14 LPPGFRFYPTDEELLVQYLCKKVAGHDFSL-RIIGEIDLYKFDPWVLPSKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITA- 106
                     79***************************9.89***************988899**************************************99. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  XP_019183034.1 107 DGRKVGIKKALVFYVGKAPKGSKTNWIMHEYRL 139
                     999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MGVRETDPLS QLSLPPGFRF YPTDEELLVQ YLCKKVAGHD FSLRIIGEID LYKFDPWVLP  60
SKATFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITADGRK VGIKKALVFY  120
VGKAPKGSKT NWIMHEYRLC DAPKKTGSAR LDEWVLCRIY KKHSSAEKAM SGGGQSKEQS  180
HGSPSSTSSQ FDDMLVALPE LDGQSFVLPA MKQEEQVDLH ELGPGSFDWN TISAGDFGVP  240
AAAAAGGNQV SAAPMTGNDV NYQNDIYAHA LAMNFQAPDD EVQSGMRSFF FPQSFSNSPD  300
PFGIRYPTQS PSLGFRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-113NAC family protein