PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019182792.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

CAMTA

Protein Properties

Length: 1097aa MW: 123587 Da PI: 6.0898

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019182792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.4	1e-56	21	137	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL n++k++++ e++trp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK g+++vl+cyYah+een++fqr XP_019182792.1 21 LEAQHRWLRPAEICEILSNYQKFRIAPEPPTRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKSGSIDVLHCYYAHGEENENFQR 115 5679***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+ywlLee++++ivlvhy+evk XP_019182792.1 116 RSYWLLEESQSNIVLVHYREVK 137 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1097 aa Download sequence
MAAESRRHGL NAQLDIEQIL LEAQHRWLRP AEICEILSNY QKFRIAPEPP TRPPSGSLFL 60 FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE KLKSGSIDVL HCYYAHGEEN ENFQRRSYWL 120 LEESQSNIVL VHYREVKGNR MNSSRVREPQ SAIPVFQQSE ESGRSSSDVG STVSSKLRPY 180 DYQVTSHVTD TTSLNSGQAS EYEDVESVYN QQSTSGVHSF TEFQSNVIPK AEDGLSAPYY 240 PAPFSDDHQG YYPAITGMNF PSTTHGNQNR NTANAYMPCR DLDFPSWENV PEKNTADYQS 300 VQFQPSISST QSAAINTING QGSAMIDFTN DFSIKQEADN HFHALEEWQA SKGNSLQSSE 360 WSVDQKMEPH QTFDFASKLD KEKHAEFHDS LEAYNILHTE PDKHPMQNGR FVKAESDGSF 420 NVDGKTDHLA FKQPLLGGVL RQGLTKLDSF DRWISKELED VNEPSLQSSS QSYWENVGNE 480 DGVDESAIAS QVQLDPYVLS PSLSQDQLFS IIDFSPTWAY AGTEIKVLIT GRFLKSYQEV 540 EKYNWACMFG ELEVPAEIIR DGVLRCHTPF QKAGRVPFYI TCSNRLACSE VREFEFRVSE 600 AQDVSTGSEN SGGSSESLIH MRFVRMLSLG SPSSLNSVPR NVDDISHIIR KINSLLQEDC 660 EWENMMHLSS GDTFLREKTK DQLLQKLLKD NLRNWLLQKV TEGGKGANVL DEGGQGVLHF 720 AAALGYDWAV PPTLASGVNV NFRDVNGWTA LHWAAFYGRE RMVGCLISLG AAPGALTDPT 780 PRHPSGITPA DLASSSGHKG IAGYLAESAL STHLSLLKLK ENREDESTEV SGLTAVQMVS 840 ERVATPVGDG DWPDGLSMKD SLAAVRNATQ AAARIHQVYR VESFQRKQIK EYGGGGEFGL 900 PDERALSLRA VKNRAGHYDE PTHSAAIRIQ NKYRSYKGRK EFLQIRQQII KIQAHVRGHQ 960 VRKNYGKIIW SVGILEKVIL RWRRKGSGLR GFKPETVTEP SSMQAQPVQE DEFDFLKEGR 1020 KQTEERLQKA LARVRSMVQY PEARDQYRRL LNVVSEMKET KKKYDGDPSN SGEVGDFDED 1080 LIDLDALLDD DTYMSFA

Sequence ? help Back to Top

Protein Sequence Length: 1097 aa Download sequence

MAAESRRHGL NAQLDIEQIL LEAQHRWLRP AEICEILSNY QKFRIAPEPP TRPPSGSLFL  60
FDRKVLRYFR KDGHNWRKKK DGKTVKEAHE KLKSGSIDVL HCYYAHGEEN ENFQRRSYWL  120
LEESQSNIVL VHYREVKGNR MNSSRVREPQ SAIPVFQQSE ESGRSSSDVG STVSSKLRPY  180
DYQVTSHVTD TTSLNSGQAS EYEDVESVYN QQSTSGVHSF TEFQSNVIPK AEDGLSAPYY  240
PAPFSDDHQG YYPAITGMNF PSTTHGNQNR NTANAYMPCR DLDFPSWENV PEKNTADYQS  300
VQFQPSISST QSAAINTING QGSAMIDFTN DFSIKQEADN HFHALEEWQA SKGNSLQSSE  360
WSVDQKMEPH QTFDFASKLD KEKHAEFHDS LEAYNILHTE PDKHPMQNGR FVKAESDGSF  420
NVDGKTDHLA FKQPLLGGVL RQGLTKLDSF DRWISKELED VNEPSLQSSS QSYWENVGNE  480
DGVDESAIAS QVQLDPYVLS PSLSQDQLFS IIDFSPTWAY AGTEIKVLIT GRFLKSYQEV  540
EKYNWACMFG ELEVPAEIIR DGVLRCHTPF QKAGRVPFYI TCSNRLACSE VREFEFRVSE  600
AQDVSTGSEN SGGSSESLIH MRFVRMLSLG SPSSLNSVPR NVDDISHIIR KINSLLQEDC  660
EWENMMHLSS GDTFLREKTK DQLLQKLLKD NLRNWLLQKV TEGGKGANVL DEGGQGVLHF  720
AAALGYDWAV PPTLASGVNV NFRDVNGWTA LHWAAFYGRE RMVGCLISLG AAPGALTDPT  780
PRHPSGITPA DLASSSGHKG IAGYLAESAL STHLSLLKLK ENREDESTEV SGLTAVQMVS  840
ERVATPVGDG DWPDGLSMKD SLAAVRNATQ AAARIHQVYR VESFQRKQIK EYGGGGEFGL  900
PDERALSLRA VKNRAGHYDE PTHSAAIRIQ NKYRSYKGRK EFLQIRQQII KIQAHVRGHQ  960
VRKNYGKIIW SVGILEKVIL RWRRKGSGLR GFKPETVTEP SSMQAQPVQE DEFDFLKEGR  1020
KQTEERLQKA LARVRSMVQY PEARDQYRRL LNVVSEMKET KKKYDGDPSN SGEVGDFDED  1080
LIDLDALLDD DTYMSFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein