PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019182738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | C2H2 | ||||||||
Protein Properties | Length: 430aa MW: 48786.4 Da PI: 9.9203 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.6 | 2.5e-06 | 56 | 78 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ sF r nL+ H r+H XP_019182738.1 56 YVCEVCNLSFQREQNLQMHRRRH 78 9*********************9 PP | |||||||
2 | zf-C2H2 | 12.8 | 0.00035 | 139 | 161 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ XP_019182738.1 139 WVCERCSKGYAVHSDFKAHLKTC 161 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence |
MLATHTISLP SSSSAPTNTH GVTTTAKRKR KPAGTPDPDA EVVYLSPETL MESDRYVCEV 60 CNLSFQREQN LQMHRRRHKL PWTLHKNERP PHEAAAAARK RAYVCPEPSC VHHDPAHALG 120 DLVGIKKHFR RKHTNHKQWV CERCSKGYAV HSDFKAHLKT CGTRGHSCDC GRVFSRVETF 180 IEHQDSCKSR RKESGGDRLH PPLKPAAFFP PIFNLNLNTT AEPHSQYRLI SERRTEATSA 240 KELIIFPVHK DGNNLSSPSS SSPHRHTLEL RELFPSKKNE EATANSAAID DEEEDHNTLL 300 RRALILRNET KAVMKVAMEQ KAKAAEKRKQ ARVLMEMANQ EMERAKKMRE QAFVTQIRNA 360 QLLQKDRLTW QMLIGSSSGA AQHRITTCDS CKLNRSTKAF QESAVNYYFP PAITHGENGD 420 NNTLMLFRPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68130.1 | 5e-97 | C2H2 family protein |