PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182720.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 371aa    MW: 40047.8 Da    PI: 7.2377
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.6e-19291325135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  XP_019182720.1 291 CSHCGVQKTPQWRAGPLGAKTLCNACGVRFKSGRL 325
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MLYRTQHHSF LNPFTFSSSA LSLTPPPSSA VSVQGMECAL KSSVRPEMAA KTAHPLGCLE  60
NELPAVGSCQ GGGGDDFFVD DLLDLSNGFS EEYEEKEKTE VPEEKGGGNS GSLVFVSVMP  120
EKRQEEAVGV NFCIEEDFSC FPGGGLNAPA DDLDSLEWLS HFVEEDSFSG YSLTYPAGKL  180
PPLPENKNRV QAEIPVRDNP SFTTPVQTKA RSKRARTGVR VWLSGSPSLT ESSTSSSSST  240
TTMSSSPPHP FFPHPNQTAE SLIGLPPAKK QKKKATHTGG GGGGQQQPRR CSHCGVQKTP  300
QWRAGPLGAK TLCNACGVRF KSGRLLPEYR PACSPTFSSQ LHSNNHRKVL EMRRKKESED  360
SPGFAPPVQS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.24e-57GATA family protein