PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182608.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family LBD
Protein Properties Length: 282aa    MW: 31667.4 Da    PI: 6.8314
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260138.22.8e-437105199
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk++rrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll++l++++reda++sl+yeAe+r+rdPvyG+vg+i+ lqq+l+q++++l 
  XP_019182608.1   7 PCAACKLQRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELHTSQREDAVNSLAYEAECRLRDPVYGCVGLISILQQKLKQVQHDLL 101
                     7*******************************************************************************************998 PP

          DUF260  96 llke 99 
                     + k+
  XP_019182608.1 102 SSKR 105
                     7766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MSSSSTPCAA CKLQRRKCTQ ECVFAPYFPP DQPQKFANVH KVFGASNVAK LLNELHTSQR  60
EDAVNSLAYE AECRLRDPVY GCVGLISILQ QKLKQVQHDL LSSKRELANY IGPAAMQPLV  120
QHPAFLQHPN NPSNYLMGLP TVVPHAAQLI AHDSLQQQQQ QQQPFIEPYH QLGGGVVRTY  180
DQQQQQQQQQ HELMTFNSGF ESGGPVNGAR IFHQMSSAAS MPPPYDTPYG MQQPGQEHFD  240
PNHDQIQLQS QPPMQQQQQQ QPPPQHQERS KSEEGRSVDP SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.12e-68LBD family protein