PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019182534.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Nin-like
Protein Properties Length: 327aa    MW: 37789.2 Da    PI: 9.4569
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019182534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.93.5e-27195244352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ++i ledl+kyF+lpi++A+k+L+v+lTvLK++CR++GI+RWPhRkiksl
  XP_019182534.1 195 ARIALEDLAKYFDLPITEASKSLKVGLTVLKKKCREFGIPRWPHRKIKSL 244
                     689*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MAPPQTRILR ALVVYINSMY KEMFRAVRVY RITGGSEETE EKEYLLGNRK DKSFGENGGS  60
RVLTLYGFDV SEQRAGVNNG VWKCVYVFDS LRTQSPLVDF CDEWIPISQN CRLVFHDLVN  120
DLHTISKLAR SAETTDSEQS LLTEACSSKN FSKHPMEMTT SVRFLDLNSI PDSDADENNG  180
ISEPKKRRAA PEDIARIALE DLAKYFDLPI TEASKSLKVG LTVLKKKCRE FGIPRWPHRK  240
IKSLDRLISN LQEEMQQQRE EDEATAMAVS KKKRMIEFEK KRIEKKPSMD IREETKKFRQ  300
DVFKRKHKAR ILERESQNRN NATLSLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.16e-52Nin-like family protein