PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019182447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 254aa MW: 27488.8 Da PI: 5.3328 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.5 | 0.00095 | 107 | 129 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F ++ L H++ H XP_019182447.1 107 FTCNFCKRKFYSSQALGGHQNAH 129 89*****************9988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MMKGSDFDLE VEASSENDYD IISQVGSNVS IQETLTDSSK MSGLGALQLS TSEPVSLDLS 60 LGFKPGCLDE MAGGGQGGSA AFSVSSTSES SNELTTQTTG SANPRVFTCN FCKRKFYSSQ 120 ALGGHQNAHK RERTLAKRAM RMAIFSEKYA SFASLPLHSY TTVAATAAAA ARSLEIKTHS 180 SLHGFAPTMR PLDFRTYSKF EPTLLSQPIY VEDDEPKMLW PGSFRPEAAS TMNHVEMAQI 240 LETDNSAPDL TLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G66140.1 | 2e-37 | C2H2 family protein |