PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019181982.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

ARR-B

Protein Properties

Length: 647aa MW: 70288.8 Da PI: 6.5138

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019181982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.7	6.3e-29	208	261	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_019181982.1 208 KPRVVWSIELHRKFVAAVNQL-GIEKAVPKRILDLMNVDGLTRENVASHLQKYRL 261 79*****************.******************************8 PP
2	Myb_DNA-binding	37	7.6e-12	210	260	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ g+t++++ s++qky+ XP_019181982.1 210 RVVWSIELHRKFVAAVNQLGIEkaVPKRILDLMNvDGLTRENVASHLQKYR 260 678***********************************************7 PP
3	Response_reg	75.9	1.4e-25	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ll+ +l+k +y +v+ ++++ al++l++++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+++++++ + + G XP_019181982.1 26 VLAVDDDPICLKLLEGLLRKCQY-HVTISSQARMALKMLRDNRdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDPKLVMKGITHG 118 799******************.***********888889***************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ +eel++ XP_019181982.1 119 ACDYLVKPVRIEELRN 134 ************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MTVEEIRGHM GSEKGNHDNF PVGMRVLAVD DDPICLKLLE GLLRKCQYHV TISSQARMAL 60 KMLRDNRDRF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANSDPKL VMKGITHGAC 120 DYLVKPVRIE ELRNIWQHVI RRKKLEPKSQ NKSGDQDRSP HGGGEGGQGA PLSGSTDQNG 180 KLNKKRKDEE DESDENGHEN EDPSTQKKPR VVWSIELHRK FVAAVNQLGI EKAVPKRILD 240 LMNVDGLTRE NVASHLQKYR LYLKRISSVA TQQANMVAAF GGKDSAYMRM GSLDGLGDFR 300 TLAGSGRFSH ASLSSYTPGG MLGRLNSAAG VSIRNLTSPS LIQPSHGQNL GKPLGTLGKL 360 TPNVSQNACL FQGIPSSLEL DQFQQSDGIR DLNPLDDSTL LGAANTFTDP GSGIGSSSNP 420 MMLHGNSQLA AGGIGNQHSL NMASLNSEHF NIGVGGSSNF LDHGRASDNW QNPIQGGCAG 480 YSSLSSTATP FEDSRGEIQR RERLVVGDAI PSINHQWGEL KQNPNSNGVY SNLTAQVPAS 540 SIVPPLSQSM DLCNDTGNRR MDASGQSNLG GSSVLLQHNK NEKLSTESRA RYYEDYLFEP 600 PKPQGAFPSQ GYGSLDDLMS SVIKREQDGA TLEGEFGFDA YSFGPCI

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MTVEEIRGHM GSEKGNHDNF PVGMRVLAVD DDPICLKLLE GLLRKCQYHV TISSQARMAL  60
KMLRDNRDRF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANSDPKL VMKGITHGAC  120
DYLVKPVRIE ELRNIWQHVI RRKKLEPKSQ NKSGDQDRSP HGGGEGGQGA PLSGSTDQNG  180
KLNKKRKDEE DESDENGHEN EDPSTQKKPR VVWSIELHRK FVAAVNQLGI EKAVPKRILD  240
LMNVDGLTRE NVASHLQKYR LYLKRISSVA TQQANMVAAF GGKDSAYMRM GSLDGLGDFR  300
TLAGSGRFSH ASLSSYTPGG MLGRLNSAAG VSIRNLTSPS LIQPSHGQNL GKPLGTLGKL  360
TPNVSQNACL FQGIPSSLEL DQFQQSDGIR DLNPLDDSTL LGAANTFTDP GSGIGSSSNP  420
MMLHGNSQLA AGGIGNQHSL NMASLNSEHF NIGVGGSSNF LDHGRASDNW QNPIQGGCAG  480
YSSLSSTATP FEDSRGEIQR RERLVVGDAI PSINHQWGEL KQNPNSNGVY SNLTAQVPAS  540
SIVPPLSQSM DLCNDTGNRR MDASGQSNLG GSSVLLQHNK NEKLSTESRA RYYEDYLFEP  600
PKPQGAFPSQ GYGSLDDLMS SVIKREQDGA TLEGEFGFDA YSFGPCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-123	ARR-B family protein