PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019181977.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ARR-B | ||||||||
Protein Properties | Length: 684aa MW: 74392.3 Da PI: 6.4702 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.6 | 6.8e-29 | 208 | 261 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_019181977.1 208 KPRVVWSIELHRKFVAAVNQL-GIEKAVPKRILDLMNVDGLTRENVASHLQKYRL 261 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 36.9 | 8.2e-12 | 210 | 260 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ g+t++++ s++qky+ XP_019181977.1 210 RVVWSIELHRKFVAAVNQLGIEkaVPKRILDLMNvDGLTRENVASHLQKYR 260 678***********************************************7 PP | |||||||
3 | Response_reg | 75.8 | 1.6e-25 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ll+ +l+k +y +v+ ++++ al++l++++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+++++++ + + G XP_019181977.1 26 VLAVDDDPICLKLLEGLLRKCQY-HVTISSQARMALKMLRDNRdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDPKLVMKGITHG 118 799********************.***************888889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ +eel++ XP_019181977.1 119 ACDYLVKPVRIEELRN 134 **************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 684 aa Download sequence |
MTVEEIRGHM GSEKGNHDNF PVGMRVLAVD DDPICLKLLE GLLRKCQYHV TISSQARMAL 60 KMLRDNRDRF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANSDPKL VMKGITHGAC 120 DYLVKPVRIE ELRNIWQHVI RRKKLEPKSQ NKSGDQDRSP HGGGEGGQGA PLSGSTDQNG 180 KLNKKRKDEE DESDENGHEN EDPSTQKKPR VVWSIELHRK FVAAVNQLGI EKAVPKRILD 240 LMNVDGLTRE NVASHLQKYR LYLKRISSVA TQQANMVAAF GGKDSAYMRM GSLDGLGDFR 300 TLAGSGRFSH ASLSSYTPGG MLGRLNSAAG VSIRNLTSPS LIQPSHGQNL GKPLGTLGKL 360 TPNVSQNACL FQGIPSSLEL DQFQQSDGIR DLNPLDDSTL LGAANTFTDP GSGIGSSSNP 420 MMLHGNSQLA AGGIGNQHSL NMASLNSEHF NIGVGGSSNF LDHGRASDNW QNPIQVTNFQ 480 SSSLPLTETF NQGQMQQNCA RENNSSIAPH LQGGCAGYSS LSSTATPFED SRGEIQRRER 540 LVVGDAIPSI NHQWGELKQN PNSNGVYSNL TAQVPASSIV PPLSQSMDLC NDTGNRRMDA 600 SGQSNLGGSS VLLQHNKNEK LSTESRARYY EDYLFEPPKP QGAFPSQGYG SLDDLMSSVI 660 KREQDGATLE GEFGFDAYSF GPCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-123 | ARR-B family protein |