PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019181015.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 285aa MW: 31169.3 Da PI: 7.6394

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019181015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.3	1.9e-34	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt+eLHerFv+av+qLGG++kAtPk+i+++m+vkgLtl+h+kSHLQkYRl XP_019181015.1 46 KPRLRWTSELHERFVDAVTQLGGPDKATPKSIMRTMGVKGLTLYHLKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	76.3	4e-24	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k+I+rtmg kg+tl+++ks++qky+ XP_019181015.1 48 RLRWTSELHERFVDAVTQLGGPdkaTPKSIMRTMGvKGLTLYHLKSHLQKYR 99 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MYSAVPLRGL GLDGGDYNHH NHQGALSLDG TNLPGDACLV LTADPKPRLR WTSELHERFV 60 DAVTQLGGPD KATPKSIMRT MGVKGLTLYH LKSHLQKYRL GKQSSKEATD NSKDASCVAE 120 SQDIGSPTSG SSRMIAQELN DGYQVTEALR AQMEVQRKLH KQLEVQRRLQ LRIEAQSKYL 180 QSILEKACKT LNHQAVAADG LEAAREELSE LSIKVANDPH TIFPLPSLPD IAVDCLTSNG 240 TPASTMSMSS LAALKKRPRG FTNEESLPLD SNMKQQVEWT LANAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-110	G2-like family protein