PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019180911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 310aa MW: 34090.8 Da PI: 8.9371 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.2 | 3.7e-41 | 26 | 102 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls+++eyhrrhkvCevhsk+p+v++ g+eqrfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ XP_019180911.1 26 CLVDGCNADLSRCREYHRRHKVCEVHSKTPKVTIGGREQRFCQQCSRFHSLAEFDEVKRSCRKRLDGHNRRRRKPQP 102 **************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MESSSSLSGS SKRAKAPGSV GQVAHCLVDG CNADLSRCRE YHRRHKVCEV HSKTPKVTIG 60 GREQRFCQQC SRFHSLAEFD EVKRSCRKRL DGHNRRRRKP QPDSLSKSSG MLFSGQQGAK 120 LVSFSSSQMF PTSTVSSTWA GFSKAENDHV VLYSNQSQPQ PHLNYIDTQN QFKFMQGSSE 180 ASSISHQPLV DQGNSSSSQK FFAAGLMSQI VDSDRALSLL SSASSVNREI GLSHVVQPGA 240 IPHPHSLVHY GGLTNYPFNA HEIETKPGAD CHAKNTAHLQ FHNVMQNAPT TDVSSTGGPH 300 HTHTFMWDQD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 83 | 100 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 5e-51 | SBP family protein |