PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019180611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 513aa MW: 57476.5 Da PI: 5.8696 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 130.2 | 7.5e-41 | 226 | 303 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv+gC+ dls+ k+yh+rhkvC+ hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_019180611.1 226 VCQVHGCNRDLSSSKDYHKRHKVCDEHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDDKRSCRKRLAGHNERRRKPQR 303 6**************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 513 aa Download sequence |
MESLNYAFEG RGFLFSDELP VDSFTRSRNL LKDWNLNPFS EVDRGMISTN HELNEGAEFM 60 ESGLAEMLQK SPVSSPGLRL SSTESDNDFA KMTLSSCMAN LDSVPREMEV EATGYNNQKS 120 EELMHHGNVK SDQSSKSSSV LSPIEPLLPA KRIRDTSLQS DIHAFQVHDI NKAALNDSNE 180 ARSGQSSKKN SDSSSAEPKN SDFSSAEPSV TAKRARITSF SSQVLVCQVH GCNRDLSSSK 240 DYHKRHKVCD EHSKTAKVIV NGIEQRFCQQ CSRFHLLAEF DDDKRSCRKR LAGHNERRRK 300 PQRDTHWDIP GSRFLDLASD RTISFLFPEI LNGSFFCQES YEEEGKPISS LLQSRGHLQE 360 RRFPVQEGEN STRSHSLLSA HKEKILSNST VHPTMIPSNH PGYLKVDQNL GMPNLGMNNT 420 SGNFTLSELD AFGVVDRDGV LEVHDGNLGA HYETQIDGGL QTSDFEDLTC YISPESGPTI 480 DLQQLSTHLL RVEQQRSYAQ VNHDTDNFCF TTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 1e-49 | SBP family protein |