PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180610.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family SBP
Protein Properties Length: 513aa    MW: 57476.5 Da    PI: 5.8696
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP130.27.5e-41226303178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqv+gC+ dls+ k+yh+rhkvC+ hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q 
  XP_019180610.1 226 VCQVHGCNRDLSSSKDYHKRHKVCDEHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDDKRSCRKRLAGHNERRRKPQR 303
                     6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    
MESLNYAFEG RGFLFSDELP VDSFTRSRNL LKDWNLNPFS EVDRGMISTN HELNEGAEFM  60
ESGLAEMLQK SPVSSPGLRL SSTESDNDFA KMTLSSCMAN LDSVPREMEV EATGYNNQKS  120
EELMHHGNVK SDQSSKSSSV LSPIEPLLPA KRIRDTSLQS DIHAFQVHDI NKAALNDSNE  180
ARSGQSSKKN SDSSSAEPKN SDFSSAEPSV TAKRARITSF SSQVLVCQVH GCNRDLSSSK  240
DYHKRHKVCD EHSKTAKVIV NGIEQRFCQQ CSRFHLLAEF DDDKRSCRKR LAGHNERRRK  300
PQRDTHWDIP GSRFLDLASD RTISFLFPEI LNGSFFCQES YEEEGKPISS LLQSRGHLQE  360
RRFPVQEGEN STRSHSLLSA HKEKILSNST VHPTMIPSNH PGYLKVDQNL GMPNLGMNNT  420
SGNFTLSELD AFGVVDRDGV LEVHDGNLGA HYETQIDGGL QTSDFEDLTC YISPESGPTI  480
DLQQLSTHLL RVEQQRSYAQ VNHDTDNFCF TTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.11e-49SBP family protein