PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180517.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 226aa    MW: 25806.1 Da    PI: 5.2327
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.9e-1075122454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RR+++N++f+eL ++l +    +  K +K++iL  A++ +++L
  XP_019180517.1  75 SKACREKLRREKLNERFAELCSVLEPE---RPVKTDKMAILGDAIRVLNQL 122
                     5678**********************9...99****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MDDLDSFQDN NWDLADFDCF VNPSPDLFWD HQSISLRSSE VDTSHHGATS QGKECLESEC  60
QRKRGRSDSC NKLGSKACRE KLRREKLNER FAELCSVLEP ERPVKTDKMA ILGDAIRVLN  120
QLKTESQEYA EMNEKLLEEI KTLKAEKNEL REEKLTLKAD KEKLEQQLQA MSVPPAGFMP  180
PHPAAYPPGP NKIAVYPSYG YLPMWHYMPP SARDTSQDHE LRPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.13e-67bHLH family protein