PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019180488.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 398aa MW: 43662.8 Da PI: 8.8638 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 127.3 | 6.1e-40 | 129 | 206 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yh++h+vCe+hsk+p+v+v g+e+rfCqqCsrfh+lsefD++krsCrrrL++hn+rrr +++ XP_019180488.1 129 RCQVEGCNLDLSSAKQYHKKHRVCEKHSKCPKVIVGGVERRFCQQCSRFHSLSEFDDKKRSCRRRLSDHNARRRNPRQ 206 6*************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence |
MEWSARWGCE SLVMLSSKPG ESPKKLQLTD SEIVEDGGEL DGGGSDSGSG VYGSDPGQVH 60 STKGSISLKK SPPRDTLVGS VEPLIGLKLG KRTYFERGNV KSLSSVAPVS SAPMSKRTKS 120 SSRGSQISRC QVEGCNLDLS SAKQYHKKHR VCEKHSKCPK VIVGGVERRF CQQCSRFHSL 180 SEFDDKKRSC RRRLSDHNAR RRNPRQDLIQ FNSTSLPSSF YDDRLQVNFV LNQVPVVHSK 240 TAANSSWDTR SSKFTISEEF ISEPEKTTSI NRQPYISGIQ LPNATGLHSN AWNWALTSKA 300 TNAEDFGQGA KVSMPPSNVC TMQEFACALS LLSTPSQSSF EPISVSNGNP AGHANQSNFP 360 AETMLHADTI PQGLPLASSE YSVFNQFPWP YPGWGCQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 4e-55 | SBP family protein |