PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019180164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 212aa MW: 23672.4 Da PI: 4.8868 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.1 | 2.2e-18 | 73 | 123 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g+ XP_019180164.1 73 YRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFAMRGA 123 9*******.**********44465..*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MDSWVSSFSP ESSSWDFRSF DNSLPFNLND SEEMLLFGVL EQAAAGREQE NSDDTNSSDS 60 VKAEAEAAAE RSYRGVRRRP WGKFAAEIRD STRNGIRVWL GTFDSAEAAA LAYDQAAFAM 120 RGAAAILNFP VERVRESLKD MRCQLEEGCS PVVALKRRHS MRKRRSGRKT GKVVVGDVKV 180 VENVVVFEDL GADYLEQLLS CSSSEIMTPN QW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 166 | MRKRRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 3e-47 | ERF family protein |