PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019180090.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 325aa    MW: 35643.2 Da    PI: 6.5155
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019180090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.92.1e-14132178354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  XP_019180090.1 132 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 178
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MQPQSTDAYM GSGAGNTRSD LMFPEVSPVL PWPVQSFNPV TFPANPVRDH DQFLIPPPPS  60
PYGGLFNRRP PPGLQFAYDG QTSEHHHLRL ITDTLAGHVV QPGLAAPFGL QAELQKMTAQ  120
EIMDAKALAA SKSHSEAERR RRERINNHLA KLRSLLPSTT KTDKASLLAE VIQHVKELRR  180
QTSIISETTQ IPTEVDELTV DNAADDDGKV MIRASLCCED RSDLLPDLIK ALKALRLRTL  240
KAEITTVGGR VRNVLFITGE EDSDGDGGND PPASQQSLQH CSISSIQEAL KAVMEKASGE  300
ESASGNAKRQ RTNNINILEQ QHRSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138143ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-84bHLH family protein