PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019179368.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 306aa MW: 33359.7 Da PI: 7.2916

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019179368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.7	2.3e-32	48	102	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prlrWt +LHerF++av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl XP_019179368.1 48 RPRLRWTADLHERFIDAVTQLGGPSKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 102 59****************************************************8 PP
2	Myb_DNA-binding	69.9	4.3e-22	50	101	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e+++dav+qlGg+ t+k+I+rtmg kg+tl ++ks++qky+ XP_019179368.1 50 RLRWTADLHERFIDAVTQLGGPskaTPKAIMRTMGvKGLTLFHLKSHLQKYR 101 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MFPRLVQPRD TIGLTQEDLH LQGSNGNAQT HRVSGAGDPC LVLTSDPRPR LRWTADLHER 60 FIDAVTQLGG PSKATPKAIM RTMGVKGLTL FHLKSHLQKY RLGLSAAYSL ESPCSNSAPQ 120 NLPAPDINEG YEVKEALRVQ MEVQSKLHLQ VEAEKHLQIR KDAERRYLAM LEAACKILAD 180 QIIGDVVPNT EGENFQGLGI KTALNQPVYP SDPADIRTGQ GSEEASPRIN TQCNDGSTES 240 CLTSHGSPAG LPLDSSSPGG KKRMFSMDSA AASFVWREAD TRTPGMHVVH MNSLGINKCN 300 EQKLSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	3e-59	G2-like family protein