PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019179039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 215aa MW: 24766 Da PI: 5.4426 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.1 | 8e-11 | 8 | 87 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknra....tksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ek yfF+k ++k+++ +r +r+ ++g+W+ + k k++++k +g + g k+ + + ++++p+ + +W+++e+ l XP_019179039.1 8 SHEKYQYFFTKLNRKSKSASRFERTrtvgKRRGTWHGQDKGKSIIHKgTGVALGYKRCFLYRNKEEPE-QDRKWLLKEFYL 87 456778***********999999964444459*************99677789****99998777777.899******976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MGDIPWDSHE KYQYFFTKLN RKSKSASRFE RTRTVGKRRG TWHGQDKGKS IIHKGTGVAL 60 GYKRCFLYRN KEEPEQDRKW LLKEFYLNDA AIMKATEKYP VLEHTKDFVV CRLQRKKSAD 120 DKPQEIKDVP IEKIWQILMG IPLDDSTATE TLPPPPPTEE ILAQPAGVVQ QSMQGENNNG 180 GCDDNNDDDD DMGILNEDPE LVAIQQRLLE ELFIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.1 | 1e-06 | NAC family protein |