PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019178807.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 837aa MW: 92766.3 Da PI: 7.9093 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 63.3 | 3.7e-20 | 322 | 421 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ ++++d +g++W++++++ +++s++yvl+ G + +L++gD+v+F++++ e++ XP_019178807.1 322 FEKVLSASDAGRIGRLVLPKACAEAYfpYINHSEGIPIRMQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDTVTFSRID-PEGK 414 99**************************555667888***************9989999999***9.********************987.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_019178807.1 415 LVMGFRK 421 7777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 837 aa Download sequence |
MGSNVCMNEL CCSTTSSEWK KGWGLKSGGF AILCYSCGSA YEKVAFCETF HLDESGWKEC 60 RMCRKRIHCG CIASKYLFEY MDLGGIVCLS CARILGGQAL RPIQIPNDDV PSGILAMKNK 120 DDTQTIRVEN RMDENILEKG RLLQLGKSVE AREPIQLFKS RNDDKIKREE PIIPAVEVMS 180 CFPNLNQQSL RTSVLEKAEN CIPKQAVKDA PDSFNQPSLN FSLSTPISTS SSGLPFPSGV 240 GKVSPFQQGQ KPHHILPKPP KAGSNSGFES KSGISTPTRV ARPPAEGRGG RNQLLPRYWP 300 RITDQELQKL SGDLKSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPY INHSEGIPIR 360 MQDIKGKEWT FQFRFWPNNN SRMYVLEGVT PCIQNMQLQA GDTVTFSRID PEGKLVMGFR 420 KATNNAEMQV SQNSTPANGG CSTEIPLSGA TDNHTNGGRE TDKPLQRNVL SPEKKKVRNI 480 GCKNKRLLMH SEDAMELRIT WEEAQELLRP PPTVNPTIVV IENHEFEEYD EPPVFGKRTI 540 FTSRSSGLPV HVLLPANWTC SDNVWDSNRC SCSAPNEMNQ KELDAFLRVS KVKFATFSCP 600 ETKRRRIVES SNDGEPSGLD ALATVAVLGE SMSELGEPSA GATTKHPRHR PGCSCIVCIQ 660 PPSGKGKHEA TCKCNVCLTV KRRFKTLMQR KKKKQSEREL ELAQGKDKDK LPRKDAAAAN 720 EPTSIPMNHP ENEAYQKEDR HDAMEEDVGT SKGQLDLNCH PNREDDMQPE EASGLLCINT 780 GADTDLPSRT YNLAMTTGKC LLAQTTEETK GKQSNHPDNN RHITPAETKS ENEPAQG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 603 | 607 | KRRRI |
2 | 681 | 692 | KRRFKTLMQRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30470.1 | 0.0 | B3 family protein |