PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019178804.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 853aa MW: 94824.5 Da PI: 7.8834 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 63.3 | 3.8e-20 | 322 | 421 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ ++++d +g++W++++++ +++s++yvl+ G + +L++gD+v+F++++ e++ XP_019178804.1 322 FEKVLSASDAGRIGRLVLPKACAEAYfpYINHSEGIPIRMQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDTVTFSRID-PEGK 414 99**************************555667888***************9989999999***9.********************987.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_019178804.1 415 LVMGFRK 421 7777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 853 aa Download sequence |
MGSNVCMNEL CCSTTSSEWK KGWGLKSGGF AILCYSCGSA YEKVAFCETF HLDESGWKEC 60 RMCRKRIHCG CIASKYLFEY MDLGGIVCLS CARILGGQAL RPIQIPNDDV PSGILAMKNK 120 DDTQTIRVEN RMDENILEKG RLLQLGKSVE AREPIQLFKS RNDDKIKREE PIIPAVEVMS 180 CFPNLNQQSL RTSVLEKAEN CIPKQAVKDA PDSFNQPSLN FSLSTPISTS SSGLPFPSGV 240 GKVSPFQQGQ KPHHILPKPP KAGSNSGFES KSGISTPTRV ARPPAEGRGG RNQLLPRYWP 300 RITDQELQKL SGDLKSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPY INHSEGIPIR 360 MQDIKGKEWT FQFRFWPNNN SRMYVLEGVT PCIQNMQLQA GDTVTFSRID PEGKLVMGFR 420 KATNNAEMQV SQNSTPANGG CSTEIPLSGA TDNHTNGGRE TDKPLQRNVL SPEKKKVRNI 480 GCKNKRLLMH SEDAMELRIT WEEAQELLRP PPTVNPTIVV IENHEFEEYD EPPVFGKRTI 540 FTSRSSGEHE QWAQCDNCSK WRRLPVHVLL PANWTCSDNV WDSNRCSCSA PNEMNQKELD 600 AFLRVSKVKF ATFSCPETKR RRIVESSNDG EPSGLDALAT VAVLGESMSE LGEPSAGATT 660 KHPRHRPGCS CIVCIQPPSG KGKHEATCKC NVCLTVKRRF KTLMQRKKKK QSERELELAQ 720 GKDKDKLPRK DAAAANEPTS IPMNHPENEA YQKEDRHDAM EEDVGTSKGQ LDLNCHPNRE 780 DDMQPEEASG LLCINTGADT DLPSRTYNLA MTTGKCLLAQ TTEETKGKQS NHPDNNRHIT 840 PAETKSENEP AQG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 619 | 623 | KRRRI |
2 | 697 | 708 | KRRFKTLMQRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30470.1 | 0.0 | B3 family protein |