PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178696.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 334aa    MW: 37277.5 Da    PI: 9.699
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY37.83.9e-12279305228
                     --SS-EEEEEEE--TT-SS-EEEEEE- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCt 28 
                     +D+y+WrKYGqK++kgs++pr  Y C 
  XP_019178696.1 279 QDEYSWRKYGQKPIKGSPHPRYCYICV 305
                     7***********************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MEEIEEANRA AVESCHRVIS LLSQPHDQNQ YAKLAIETGE AVHKFKKVVS KLNSTLGHAR  60
VRKVKKIHTP SLPPSILLEN PMFRGDDDHP KALQLLPAIS LEPSNQEKGS GVKSGLALGN  120
PPSFELNLHG KTPVSLSHQT PIPSYHFLQQ QQHQQRYQQQ LKQQQAEMIY RRSNSGISLN  180
FDSSTCTPTM SSTRSFISSL SIDGSVANMD GNAFHLIGAS RSADLSSYQH KKRCSGRGED  240
GSTKCGSSSR CHCSKKRKHR VKRSIKVPAI SNKLADIPQD EYSWRKYGQK PIKGSPHPRY  300
CYICVCIYIV RLLDCILSCK LKSEEHRCSC SALD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.24e-54WRKY family protein