PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019178695.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 346aa    MW: 38539.6 Da    PI: 10.0784
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019178695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.16.6e-32279337259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYeg+Hnh+
  XP_019178695.1 279 QDEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDPSMLIVTYEGDHNHP 337
                     7*************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MEEIEEANRA AVESCHRVIS LLSQPHDQNQ YAKLAIETGE AVHKFKKVVS KLNSTLGHAR  60
VRKVKKIHTP SLPPSILLEN PMFRGDDDHP KALQLLPAIS LEPSNQEKGS GVKSGLALGN  120
PPSFELNLHG KTPVSLSHQT PIPSYHFLQQ QQHQQRYQQQ LKQQQAEMIY RRSNSGISLN  180
FDSSTCTPTM SSTRSFISSL SIDGSVANMD GNAFHLIGAS RSADLSSYQH KKRCSGRGED  240
GSTKCGSSSR CHCSKKRKHR VKRSIKVPAI SNKLADIPQD EYSWRKYGQK PIKGSPHPRG  300
YYKCSSMRGC PARKHVERCL EDPSMLIVTY EGDHNHPRVP SQSANT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-87WRKY family protein