PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019178654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | B3 | ||||||||
Protein Properties | Length: 841aa MW: 93052.8 Da PI: 6.6747 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 62.8 | 5.6e-20 | 330 | 429 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e++ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_019178654.1 330 FEKVLSASDAGRIGRLVLPKACAEAYfpAINHSEGIAIRVQDIKGQEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGK 422 99**************************888999******************9989999999***9.********************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv++ ++ XP_019178654.1 423 LVMGYRK 429 7777665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 841 aa Download sequence |
MGSKFCMNEL CRATTSSEWK KGWGLKSGGF ATLCSNCGSA YEHFAFCDMF HLNDSGWREC 60 RMCGKRIHCG CIASRYLYDY MDFGGIGCMS CVRRLGGHAL RPIQTPNDDI PNGTLTMNKI 120 GDTQRVDTEN RMDENDFDKG RLLHLSRTIE AHKPGQLFQS QNNGKIKQEP AIPIREAACL 180 PNLNQQSVET SIFGKADINI PKQGVNVNVK DTYESINQTS MNFSLSTPVG TSTSALHILA 240 GIVEGREQNK VSPFQQGQKA HHILPKPVKA AHSSGSESKK GMTTPNRIAR PPGEGRGGRN 300 QLLPRYWPRI TDQELQKLSG DLKSNIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPAIN 360 HSEGIAIRVQ DIKGQEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG 420 GKLVMGYRKA TNNADAQDSP NPPLPNGGSC AETQVSGATD NDMNESKAID DPLPRTVSIP 480 EKKKTRNIGS KNKRLLMQAK DALELKITWE EAQDLLRPPP SGKPTIVVIE ECEFEEYEEP 540 PVFGKRTIFT ARPSGEQDQW AQCDSCSKWR RLPMHALLPP RWTCLDNIWD ANRCSCSAPD 600 ELSPKEMDAF LRDNMDSKRR RITENGHDCE PSGLDALATV AVLGDNIGDL GEPSVGVGAT 660 TRHPRHRPGC SCIVCIQPPS GKGKHLPTCK CNVCLTVRRR FKTLMLRKKK KQSEREAELG 720 QGNEEPPRDG SEIEGASGLA LIHMNHSEND SNPNGDNDPM EDAGTSKGQL DLNCDPNRED 780 DMLAETPLNE AVEKNDLETL RDCMLAQAAR EEEGKRGDDT QIASSDSKQE NNRENGAQFL 840 D |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 618 | 622 | KRRRI |
2 | 698 | 709 | RRRFKTLMLRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30470.1 | 0.0 | B3 family protein |