PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019178407.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 804aa MW: 87580.8 Da PI: 7.2768

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019178407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	2.9e-09	614	646	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LA+++gLt +qV++WF N R + XP_019178407.1 614 HPYPTDADKHMLATQTGLTRNQVSNWFINARVR 646 89*****************************87 PP
2	BELL	93.1	2.6e-30	466	536	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e q+ ++kLl ++eeV++rY+qy++q+++v+ssFe vagl +a+pY+ lAlk+iSr+F ++k ai++q+ XP_019178407.1 466 RSEYQQTRVKLLYMQEEVCRRYSQYHQQMHMVVSSFESVAGLSAATPYILLALKTISRSFYSIKSAISDQL 536 5789999*************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
METRTHRPDL HVVQQSRRDK LRVQNIPSSS SSQYLGDYSG NCEHWSLQNQ GPNMDLAQLP 60 SCRYGNISYE QSVLSSEMLN FGSDSQSLVA HKNDAVTVNQ EPPSSPPGDK AGGGDNGQFS 120 NSFNHFVNVS GEAQNWKSVG SQQQICCDWN NNVGANYSSV SPMAVGGSSS SRGLIPNNCV 180 PVSGTHSVKP GYFKYNEAQS NLSNTTTSVI PGQFEDLQFS AYCPEVTLGS CIETKMTSVS 240 SLANPRESGR GSWLDSRSEL HLLPTYADQS SVLCVNSDSE MVNRAVEGWQ RNDISSTTQA 300 LSLSLSSLAA PSKPHFGAVG SQHNVSGDLN CGFDAMPGLR PLRSDYLYSS SKQLSKMLEN 360 AGACQDTVVR NSTLSHLNVV PFGPFTGYAT ILKSSRFLKP AQQLLDEVCS FSGHSALTVS 420 ALTKRVLDEI CLSNDGIEGD NSGLSSTLFG SNGSGVCSSS NESYLRSEYQ QTRVKLLYMQ 480 EEVCRRYSQY HQQMHMVVSS FESVAGLSAA TPYILLALKT ISRSFYSIKS AISDQLRNIR 540 KTLGQQLLSH AGRSKGDRVS SSLKLADHPL EKQRAIGSGM GFLDPQPQVW RPQRGLPERA 600 VAVLRAWLFD HFLHPYPTDA DKHMLATQTG LTRNQVSNWF INARVRVWKP MVEEIHMLET 660 KAMSNVGKPQ VTSATEGATT QHLNGFAFQN ESQYSNRLSM RGIPPTPGLQ AECCTGIGER 720 SHPASWSTAQ EKQSRINCHI PAAAAAGMDG PLMGFMPYHH QNNLEIGGLG SVSLTLGLRQ 780 SAAEGVQHEP HQHLGGQIIH DYLG

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

METRTHRPDL HVVQQSRRDK LRVQNIPSSS SSQYLGDYSG NCEHWSLQNQ GPNMDLAQLP  60
SCRYGNISYE QSVLSSEMLN FGSDSQSLVA HKNDAVTVNQ EPPSSPPGDK AGGGDNGQFS  120
NSFNHFVNVS GEAQNWKSVG SQQQICCDWN NNVGANYSSV SPMAVGGSSS SRGLIPNNCV  180
PVSGTHSVKP GYFKYNEAQS NLSNTTTSVI PGQFEDLQFS AYCPEVTLGS CIETKMTSVS  240
SLANPRESGR GSWLDSRSEL HLLPTYADQS SVLCVNSDSE MVNRAVEGWQ RNDISSTTQA  300
LSLSLSSLAA PSKPHFGAVG SQHNVSGDLN CGFDAMPGLR PLRSDYLYSS SKQLSKMLEN  360
AGACQDTVVR NSTLSHLNVV PFGPFTGYAT ILKSSRFLKP AQQLLDEVCS FSGHSALTVS  420
ALTKRVLDEI CLSNDGIEGD NSGLSSTLFG SNGSGVCSSS NESYLRSEYQ QTRVKLLYMQ  480
EEVCRRYSQY HQQMHMVVSS FESVAGLSAA TPYILLALKT ISRSFYSIKS AISDQLRNIR  540
KTLGQQLLSH AGRSKGDRVS SSLKLADHPL EKQRAIGSGM GFLDPQPQVW RPQRGLPERA  600
VAVLRAWLFD HFLHPYPTDA DKHMLATQTG LTRNQVSNWF INARVRVWKP MVEEIHMLET  660
KAMSNVGKPQ VTSATEGATT QHLNGFAFQN ESQYSNRLSM RGIPPTPGLQ AECCTGIGER  720
SHPASWSTAQ EKQSRINCHI PAAAAAGMDG PLMGFMPYHH QNNLEIGGLG SVSLTLGLRQ  780
SAAEGVQHEP HQHLGGQIIH DYLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-80	TALE family protein