PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019178386.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 257aa MW: 29177 Da PI: 7.5245 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 158.7 | 2.4e-49 | 10 | 140 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrF P+deelv++yL kkv +++ ++++ + e+d++++ePw+Lp+ +k ++kewyfFs rd+kyatg r+nrat+ gyWk tgkd+++l+ XP_019178386.1 10 LPPGFRFYPSDEELVCHYLYKKVIANNRRVSKYtLVEIDLHTCEPWQLPEVAKLNSKEWYFFSFRDRKYATGYRSNRATTCGYWKGTGKDRRILD 104 79********************999998887767***************88888999************************************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrle 129 +g++ g++ktLvfy+ rap+g+ktdW+mhe+rle XP_019178386.1 105 PaTGTVLGMRKTLVFYHHRAPHGVKTDWIMHEFRLE 140 978889***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGLRDIEATL PPGFRFYPSD EELVCHYLYK KVIANNRRVS KYTLVEIDLH TCEPWQLPEV 60 AKLNSKEWYF FSFRDRKYAT GYRSNRATTC GYWKGTGKDR RILDPATGTV LGMRKTLVFY 120 HHRAPHGVKT DWIMHEFRLE NPHIPPKEEW VLCRVFHKSK ATGICHESIV DATAGTSASS 180 PNAVNNAFLP VGYSPMSGVT AGNVGMAAQS KREEDDEYGF FYNVNCEEAN FQAGGGVPLW 240 LEDFCRFDNG GNGLLFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 3e-83 | NAC family protein |